How to Manage Projects in Microsoft Dynamics 365 Finance and Empower Your Entire Project Organization

Written by Matt Mong

D365 Finance Project Management

You can manage projects in Microsoft Dynamics 365 Finance through the Project management and accounting capabilities in D365 Finance, with support for project setup, work breakdown structures, budgets, costs, time, expenses, invoicing, and revenue recognition.

For basic project administration, this may be enough. But project-centric companies often need more than project accounting. They need project delivery, financial control, forecasting, billing, scheduling, resourcing, governance, and reporting to work together inside D365 Finance. That is where companies should evaluate whether standard D365 Finance, Project Operations, or a D365 Finance-native project business platform like PlanAutomate is the right path.

From Project Administration to a Purpose-Built Project System that Empowers Your Teams

Project-Driven Business Needs in the Digital Age

Project-centric companies often want Microsoft Dynamics 365 Finance to become their single source of truth. That is the right goal. D365 Finance gives the business a strong ERP foundation for financials, supply chain, procurement, inventory, billing, and reporting.

The challenge is that project-centric work does not stop at accounting. Project teams need to plan work, manage schedules, control budgets, forecast outcomes, manage resources, handle changes, and give executives reliable visibility into performance and risk.

This article explains how projects can be managed in D365 Finance, where the standard tools help, where gaps often appear, and how companies can choose the right path if they need a stronger project business foundation.

The Standard D365 Finance Project Management Approach: Project Operations

D365 Finance includes Project management and accounting capabilities that provide a financial foundation for managing project-related work. Depending on how you deploy it, Project Operations will provide different levels of capabilities. For the purpose of this article, we will focus on the module inside D365 Finance, called Project Management & Accounting.

This project management module provides a set of tools that meet some basic project management needs. These capabilities help companies create projects, define project types, track costs, manage budgets, process time and expenses, invoice customers, and recognize revenue. This is a useful foundation. For companies with straightforward project needs, it may provide enough structure to manage project accounting inside the ERP.

This standard D365 Finance project management path typically supports:

  • Project Setup & Project Types: It supports various project types, including Fixed Price, where a lump sum is billed for a specific scope of work, and Time & Material, which invoices customers based on hours and resources used. It also allows for Internal and Investment projects.
  • Financial & Cost Tracking: The module helps manage labor costs, material transactions, and expenses. Project costs can be tracked against a budget, ensuring that financial data is centrally located within the ERP.
  • Invoicing & Revenue Recognition: Project Operations streamlines customer invoicing and offers different methods for revenue recognition, such as the widely used “percentage of completion” method for compliance and accurate reporting.
  • Timesheets & Expense Tracking: These basic functions allow employees and contractors to record their time and expenses directly in the system, providing a basic level of project data capture.

Where standard D365 Finance project management may not be enough

For project-centric companies, the issue is not whether D365 Finance can store project financial data. The issue is whether the system can support the way the business actually plans, executes, controls, and reports on projects.

Companies should look carefully at needs and gaps around:

  • Project planning and scheduling depth
  • Dedicated Work breakdown structures that align with cost control
  • Dedicated Cost breakdown structures
  • Estimate-at-completion and forecasting
  • Change orders and governance
  • Resource planning and capacity management
  • Project billing complexity
  • Executive visibility into margin, risk, and project performance
  • Reliance on spreadsheets or disconnected project tools

If these areas matter to your business, you may need more than standard project accounting. You may need an alternative D365 Finance-native project business platform that keeps project execution and financial control connected.

If your business needs project delivery, financial control, forecasting, billing, scheduling, and governance connected in one operating model, you may be looking for a Project ERP rather than basic project accounting.

The question is: what is the safest and most effective way to manage projects in D365 Finance?

Project Operations can support basic project needs in D365 Finance. PlanAutomate gives project-centric companies a broader project business foundation inside D365 Finance, with deeper capabilities that allow for more room to grow as planning, forecasting, costing, governance, and resource management needs expand.

What happens as your project needs grow?

A project system should not only solve today’s basic administration needs. It should also give the business room to grow without changing architecture, adding disconnected systems, or relying on spreadsheets and custom workarounds.

That is why project-centric companies should evaluate how D365 Finance, Project Operations, and PlanAutomate can support the full project business lifecycle.

In short, the Project Operations module in D365 Finance provides some core ERP functionality for projects. But what happens when your project management needs change? Project Operations has no add-ons to grow with you.

Learn your options for Project Operations vs. PlanAutomate:

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MS D365 ProjOps. Microsoft -
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PlanAutomate Essentials Base €135 /mo
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AEC Add-on €60 /mo
ETO Manufacturing Add-on €60 /mo
Professional Services Add-on €60 /mo
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Insight & Analysis Add-on €30 /mo
Governance Add-on €30 /mo
Advanced PM Add-on €60 /mo
Project Modeling Add-on €20 /mo
Risk Mgmt. Add-on €20 /mo
Insights and analysis
Power BI cubes                
Embedded Power BI reports                  
Portfolio analytics                  
Portfolio performance                  
Performance index                  
PlanVector AI (see agents below)                  
AI Agents
Planner agent                  
RAIDO agent                  
Costing agent                  
Change management agent                  
Staffing agent                  
Reporting agent                  
PayFlow                    
Time Entry & Expense                    
Planning
Work Breakdown Structure (WBS)                
Gantt & drag and drop                
Critical path and float                  
Task network                
Role and resource scheduling                
Capacity management                
Soft/hard commit                
Auto assign resources                
Task and Gantt filtering                  
Task workflow                  
Custom grid views                  
Activity backlog                  
WBS sensor points                  
Manual tasks            
Material planning                
Material constraints                
What-if simulation              
Capacity leveling              
Task driven serviceline and line property              
Custom project/role/task attributes              
Baselines                  
Embedded projects (WBS)                  
Constraint types                  
Gateway reviews and deadline management                  
Task tags                  
Project calendar                  
Project phases                  
Schedule backwards from finish                  
Estimation
Budget versions                
Templates                
Create from quote                
Create from existing project                
Approvals                
Copy from WBS                
Import/Export XML                  
Cashflow                  
Qty budgets                
Retainers                  
Models                  
Cost breakdown structure
Embedded projects (CBS)                
Posting status                  
EVA principles                  
Cost codes & cost code reporting                  
Period close                  
Portfolio organization
Stakeholder workspace                  
Auto pilot                  
Project sensor points                  
Stakeholders                  
POS security                  
Batch lists                  
Risk management
RAIDO register                  
Costing sheet
Cost (view)                
Revenue (view)                
By category                
By category group                
Embedded projects                
CTC and EAC                
Variance tracking                
Contract line items (view)                  
Dedicated Cost Breakdown Structure (CBS)                  
Budget periods                  
CBS sensor points                  
Variance reason codes                  
Deliverables (view)              
Change control (view)              
WBS estimate (view)              
Revenue to complete (view)              
Get WBS estimates              
Retainer                
Burn rate (view)                  
Earned value (view)                  
RAIDO (view)                  
Labor quantities (view)                  
Cashflow                  
Portfolio management
Project portfolios                
Portfolio status                  
Portfolio sensor points                  
Project breakdown structure                  
Project budget periods                  
Change management
Revisions                
Change orders                  
Change requests                  
Copy Change set              
Copy WBS              
WBS change sets              
Resource management
Resource attributes                
Calendars and exceptions                
Resource loan management                
Grade, service & location                
Labor rates by grade and service line                
Project resourcing (dispatch)                  
Workspaces
Project management                
Project team member                  
Project costing                  
Project planning                  
Project change management                  
Project capacity management                  
Project material constraints                
Project subcontract management                
Project stakeholder                  
Project period close                  
Project RAIDO                  
Subcontract management
Subcontract management                
Timesheet management
My assignments & widget                
Team member workspace                  
My calendar                  
Task status update                  
My tracked RAIDO                  
Other
Fee Estimator                  
Electronic invoicing                    
Experience mgt.                    
Mobile access                  
AI Brief builder                    
Whitespace analysis                    
Copilot & AI Automation                
More

Project management gaps to look for in D365 Finance and Project Operations

When project-centric companies manage projects in D365 Finance, the common gaps are usually not isolated feature gaps. They are operating model gaps.

The business may be able to track costs, but still struggle to connect project planning, forecasting, billing, governance, resources, and executive reporting in one reliable view. These gaps create manual work, slow decisions, and make project teams feel like data administrators instead of project leaders.

While the Project Operations module in D365 Finance is a primarily a limited scheduling tool that you also have to use as your financial structure, it often falls short in some key areas for project-driven companies. For organizations that need to manage operations and financials of projects independently Project Operations leaves project managers feeling more like data administrators than strategic leaders. This is where the limitations of the system become apparent:

  • Lack of a Unified System: Teams often find themselves still relying on spreadsheets and disconnected tools for detailed project operations, including estimations, work breakdown structures (WBS), advanced schedules, and risk management. This creates data silos and a fragmented view, making it nearly impossible to have a single source of truth. The result is a disempowered team that spends time reconciling data instead of collaborating.
project management chaos
  • Reactive, Not Proactive: The native tools in Project Operations are fine for some financial record-keeping, but they typically lack real-time insights for project managers that enable them with actionable intelligence and foresight as to where the project is headed. This leaves project teams in a reactive state, spending more time firefighting problems rather than proactively managing them.
  • Focus on Accounting, Not Project Management: The system does have Project Accounting that is built for accounting financial control, but not for automating and controlling the entire project lifecycle. This leads to a lot of manual administrative work, like data consolidation, reporting, and constant updates, that bogs down project professionals and prevents them from focusing on strategic outcomes.
  • The “One-Size-Fits-All” Problem: D365’s general-purpose nature doesn’t fully cater to the unique governance, modeling, and operational needs of many project-driven industries. Without purpose-built functionality, companies often have to make costly and risky customizations or compromise on their processes, which can limit the team’s ability to operate efficiently.

Bridging the Gap: What to Look for in a Purpose-Built Solution for D365

When native D365 Finance and Project Operations capabilities fall short for your project management needs, or you want to ensure you have options as you grow, project-driven businesses need a solution that is purpose-built to extend their investment. This is where PlanAutomate can make the difference by providing a new level of empowerment.

Here are the key capabilities such a system should offer:

End-to-End Unification

A solution should unify project operations, financials, and analytics into a single system of record, eliminating data silos and creating a single source of truth. This empowers every team, from finance to operations, with the same data, enabling confident and collaborative decision-making.

Proactive Project Intelligence

It must go beyond simple reporting of how things were two weeks ago, or longer. It should offer real-time visibility into all project KPIs. With the help of AI, it can even provide project managers and executives with better foresight to help identify risks before they escalate. Providing real-time alerts and offering actionable recommendations to keep projects on track empowers project professionals with the foresight to be proactive leaders.

Elevate the Project Management Role with Automation

The system should automate low-value administrative tasks, such as reporting, data consolidation, and manual updates, freeing project professionals to focus on strategic, high-value work that drives project success. This empowers teams to own outcomes, not just processes.

AI that Empowers Everyone in Your Project Organization

What if you could provide everyone on your project team with an AI assistant with the equivalent of decades of project management experience, constantly monitoring and analyzing your projects? Learn more.

The Ability to Grow as You Need

The system should have the ability to easily add functionality as your needs grow to meet the demand of your business. Learn more.

Native D365 Finance Integration

True enterprise value comes from a solution that is natively embedded in the D365 platform, not a disconnected bolt-on. This empowers users with a consistent experience, shared data, and streamlined processes across all departments, eliminating the delay, risk, and cost of third-party integrations.

Full-Service Partnership

Beyond the system itself, you should look for a partner in your transformation journey with Dynamics under one roof. The ideal partner should offer not just the software, but also a process-first approach to D365 implementation and consulting, ensuring maximum impact and faster time to value. This empowers your business with the expertise to navigate complex transformations successfully. Learn more.

Need a stronger project management path in D365 Finance?

Adeaca helps project-centric companies evaluate whether standard D365 Finance, Project Operations, or PlanAutomate is the right path for managing projects, financial control, forecasting, billing, scheduling, and governance.

Talk with Adeaca about your D365 Finance project strategy.

Choosing the right system path also depends on the right implementation partner. For project-centric companies, the partner needs to understand Microsoft Dynamics 365 Finance, project operations, project financial control, and the operating model behind project-driven work.

Learn what to look for in a Microsoft Dynamics 365 partner.


From Project Administration to Project Business Automation that Empowers People

While D365 Finance provides a strong financial foundation, it’s a platform that can be elevated to meet the unique needs of project-driven businesses. The right solution goes beyond basic accounting and helps you plan, execute, and govern projects with greater efficiency, predictability, and profitability.

By choosing a purpose-built project business automation platform that can grow with you, you can empower your teams and ensure your business thrives.

Is your organization ready to transform project administration into project business automation? Discover how PlanAutomate can help you get the most out of your Microsoft Dynamics 365 investment.

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Matt Mong

Matt is the CMO & Chief Product Evangelist at Adeaca. Matt leads Adeaca’s growth strategies and market positioning and serves as the company’s Chief Evangelist. He is responsible for driving the Adeaca's Microsoft Partner identity of the firm, focusing on delivering specialized Microsoft Dynamics 365 solutions to project-driven companies. Matt plays a central role in the company’s thought leadership, frequently appearing in podcasts, videos, and interviews to discuss the evolution of enterprise project management and AI.